BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021H09SP1|AL427834
(1001 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig746 1632 0.0
>3x_Contig746
Length = 3129
Score = 1632 bits (819), Expect = 0.0
Identities = 878/897 (97%), Gaps = 3/897 (0%)
Strand = Plus / Plus
Query: 1 atccaaaggacgcagaattcacctggtccagtggcagcgactgaggaatgaaagtctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2236 atccaaaggacgcagaattcacctggtccagtggcagcgactgaggaatgaaagtctgtt 2295
Query: 61 cattgtaaccatggggagaagtcccaagactggaaatcccatttgaacttctcatagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2296 cattgtaaccatggggagaagtcccaagactggaaatcccatttgaacttctcatagatc 2355
Query: 121 tgacatcctggggtacttgtccaatggaaacggaagccatacccgacacaccaacggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2356 tgacatcctggggtacttgtccaatggaaacggaagccatacccgacacaccaacggaag 2415
Query: 181 aaggagaaacatcatctgaatctctagctttcataccagcattcaaatactgcggattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2416 aaggagaaacatcatctgaatctctagctttcataccagcattcaaatactgcggattaa 2475
Query: 241 acgcaccttgaggaactgaatccatctgcgaacgaccgttcacgtagccatttccattta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2476 acgcaccttgaggaactgaatccatctgcgaacgaccgttcacgtagccatttccattta 2535
Query: 301 tatttatattaccattgccatttgtacctgtactttggaaactctgacgcatctgttgcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2536 tatttatattaccattgccatttgtacctgtactttggaaactctgacgcatctgttgcg 2595
Query: 361 attcaggagaaaagaagtcataactgtcagcatcactactttcctcgctagtcaacgact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2596 attcaggagaaaagaagtcataactgtcagcatcactactttcctcgctagtcaacgact 2655
Query: 421 gcvaaaacatatctacctcggaaaatgagctgggagctcctaaattaacactatgagtga 480
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2656 gcaaaaacatatctacctcggaaaatgagctgggagctcctaaattcacactatgagtga 2715
Query: 481 acggcatattgcgtttgtkatattcgtttattctgcaccgaaatcgttatagctgtcgaa 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2716 acggcatattgcgtttgtcatattcgtttattctgcaccgaaatcgttatagctgtcgaa 2775
Query: 541 gcaacaaccaaaaagtgactaactgcgaatgtttaaacaattatccgaaagaratacact 600
||||||||||||||||||||||||||| |||| ||| ||||||||||||||| ||||||
Sbjct: 2776 gcaacaaccaaaaagtgactaactgcgcatgtctaaccaattatccgaaagacctacact 2835
Query: 601 ctcagatacatatatatrgatggaaaggrtgataaaagttcacaagtaatccttgtttat 660
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2836 ctcagatacatatatatagatggaaaggatgataaaagttcacaagtaatccttgtttat 2895
Query: 661 ggaaagakcctttctttattcttggtatcttgatcgttttttgttgtatcgttagtgcct 720
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2896 ggaaagatcctttctttattcttggtatcttgatcgttttttgttgtatcgttagtgcct 2955
Query: 721 gggacgacatgtcacggtgattgtgcggtgttttctgggtaaatttctattttataaaaa 780
||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 2956 gggtcgacatgtcacggtgattgtgcggtgttttctgggtaaatttctatttttttaaat 3015
Query: 781 tggtgtgattccagaggattttggggcgcccaaatttttctggaggtatccggaaaaact 840
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 3016 tggtgtgattccagaggatttt-gggcgcccaaatttttctggaggtat-cggaaaaact 3073
Query: 841 atttgggggggaagtttccggatgacataagcrggctactagatagtggcttcctcc 897
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3074 atttggggggg-agtttccggatgacataagcaggctactagatagtggcttcctcc 3129
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6112
Number of Sequences: 1807
Number of extensions: 6112
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 1001
length of database: 10,358,551
effective HSP length: 16
effective length of query: 985
effective length of database: 10,329,639
effective search space: 10174694415
effective search space used: 10174694415
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)